TY - JOUR
T1 - COVLIAS 3.0
T2 - cloud-based quantized hybrid UNet3+ deep learning for COVID-19 lesion detection in lung computed tomography
AU - Agarwal, Sushant
AU - Saxena, Sanjay
AU - Carriero, Alessandro
AU - Chabert, Gian Luca
AU - Ravindran, Gobinath
AU - Paul, Sudip
AU - Laird, John R.
AU - Garg, Deepak
AU - Fatemi, Mostafa
AU - Mohanty, Lopamudra
AU - Dubey, Arun K.
AU - Singh, Rajesh
AU - Fouda, Mostafa M.
AU - Singh, Narpinder
AU - Naidu, Subbaram
AU - Viskovic, Klaudija
AU - Kukuljan, Melita
AU - Kalra, Manudeep K.
AU - Saba, Luca
AU - Suri, Jasjit S.
N1 - Publisher Copyright:
Copyright © 2024 Agarwal, Saxena, Carriero, Chabert, Ravindran, Paul, Laird, Garg, Fatemi, Mohanty, Dubey, Singh, Fouda, Singh, Naidu, Viskovic, Kukuljan, Kalra, Saba and Suri.
PY - 2024
Y1 - 2024
N2 - Background and novelty: When RT-PCR is ineffective in early diagnosis and understanding of COVID-19 severity, Computed Tomography (CT) scans are needed for COVID diagnosis, especially in patients having high ground-glass opacities, consolidations, and crazy paving. Radiologists find the manual method for lesion detection in CT very challenging and tedious. Previously solo deep learning (SDL) was tried but they had low to moderate-level performance. This study presents two new cloud-based quantized deep learning UNet3+ hybrid (HDL) models, which incorporated full-scale skip connections to enhance and improve the detections. Methodology: Annotations from expert radiologists were used to train one SDL (UNet3+), and two HDL models, namely, VGG-UNet3+ and ResNet-UNet3+. For accuracy, 5-fold cross-validation protocols, training on 3,500 CT scans, and testing on unseen 500 CT scans were adopted in the cloud framework. Two kinds of loss functions were used: Dice Similarity (DS) and binary cross-entropy (BCE). Performance was evaluated using (i) Area error, (ii) DS, (iii) Jaccard Index, (iii) Bland–Altman, and (iv) Correlation plots. Results: Among the two HDL models, ResNet-UNet3+ was superior to UNet3+ by 17 and 10% for Dice and BCE loss. The models were further compressed using quantization showing a percentage size reduction of 66.76, 36.64, and 46.23%, respectively, for UNet3+, VGG-UNet3+, and ResNet-UNet3+. Its stability and reliability were proved by statistical tests such as the Mann–Whitney, Paired t-Test, Wilcoxon test, and Friedman test all of which had a p < 0.001. Conclusion: Full-scale skip connections of UNet3+ with VGG and ResNet in HDL framework proved the hypothesis showing powerful results improving the detection accuracy of COVID-19.
AB - Background and novelty: When RT-PCR is ineffective in early diagnosis and understanding of COVID-19 severity, Computed Tomography (CT) scans are needed for COVID diagnosis, especially in patients having high ground-glass opacities, consolidations, and crazy paving. Radiologists find the manual method for lesion detection in CT very challenging and tedious. Previously solo deep learning (SDL) was tried but they had low to moderate-level performance. This study presents two new cloud-based quantized deep learning UNet3+ hybrid (HDL) models, which incorporated full-scale skip connections to enhance and improve the detections. Methodology: Annotations from expert radiologists were used to train one SDL (UNet3+), and two HDL models, namely, VGG-UNet3+ and ResNet-UNet3+. For accuracy, 5-fold cross-validation protocols, training on 3,500 CT scans, and testing on unseen 500 CT scans were adopted in the cloud framework. Two kinds of loss functions were used: Dice Similarity (DS) and binary cross-entropy (BCE). Performance was evaluated using (i) Area error, (ii) DS, (iii) Jaccard Index, (iii) Bland–Altman, and (iv) Correlation plots. Results: Among the two HDL models, ResNet-UNet3+ was superior to UNet3+ by 17 and 10% for Dice and BCE loss. The models were further compressed using quantization showing a percentage size reduction of 66.76, 36.64, and 46.23%, respectively, for UNet3+, VGG-UNet3+, and ResNet-UNet3+. Its stability and reliability were proved by statistical tests such as the Mann–Whitney, Paired t-Test, Wilcoxon test, and Friedman test all of which had a p < 0.001. Conclusion: Full-scale skip connections of UNet3+ with VGG and ResNet in HDL framework proved the hypothesis showing powerful results improving the detection accuracy of COVID-19.
KW - COVID lesions
KW - COVID-19
KW - computed tomography
KW - glass ground opacities
KW - hybrid deep learning
KW - quantization
KW - segmentation
UR - https://www.scopus.com/pages/publications/85198478546
U2 - 10.3389/frai.2024.1304483
DO - 10.3389/frai.2024.1304483
M3 - Article
SN - 2624-8212
VL - 7
JO - Frontiers in Artificial Intelligence
JF - Frontiers in Artificial Intelligence
M1 - 1304483
ER -