TY - GEN
T1 - An agent based modeling approach for the analysis of tuberculosis - Immune system dynamics
AU - Pappalardo, Francesco
AU - Russo, Giulia
AU - Pennisi, Marzio
AU - Sgroi, Giuseppe
AU - Alessandro, Giuseppe
AU - Palumbo, Parasiliti
AU - Motta, Santo
AU - Fichera, Epifanio
N1 - Publisher Copyright:
© 2018 IEEE.
PY - 2019/1/21
Y1 - 2019/1/21
N2 - Tuberculosis is one of the world's deadliest diseases that infects one third of the world's population, mostly in developing countries. However, tuberculosis is becoming again very dangerous also for developed countries, due to the increased mobility of the world population, and the appearance of several new bacterial strains that are multi-drug resistant. With the aim to help in finding new therapeutic interventions against tuberculosis, we present the application of a computational modeling infrastructure named UISS (Universal Immune System Simulator) able to simulate the main features and dynamics of the immune system activities. We show a further development of UISS to consider the underlying tuberculosis pathogenesis and its interaction with the host immune system. Even though the model can be further personalized employing immunological parameters and genetic information, based on the available data, we obtained simulation scenarios able to reproduce persistent latent infection or the development of active disease. In particular, UISS is able to simulate those mechanisms in which M. tuberculosis is involved in the early influx of alveolar macrophages and recruited neutrophils until the formation of the tuberculous granuloma, at both cellular and molecular levels.
AB - Tuberculosis is one of the world's deadliest diseases that infects one third of the world's population, mostly in developing countries. However, tuberculosis is becoming again very dangerous also for developed countries, due to the increased mobility of the world population, and the appearance of several new bacterial strains that are multi-drug resistant. With the aim to help in finding new therapeutic interventions against tuberculosis, we present the application of a computational modeling infrastructure named UISS (Universal Immune System Simulator) able to simulate the main features and dynamics of the immune system activities. We show a further development of UISS to consider the underlying tuberculosis pathogenesis and its interaction with the host immune system. Even though the model can be further personalized employing immunological parameters and genetic information, based on the available data, we obtained simulation scenarios able to reproduce persistent latent infection or the development of active disease. In particular, UISS is able to simulate those mechanisms in which M. tuberculosis is involved in the early influx of alveolar macrophages and recruited neutrophils until the formation of the tuberculous granuloma, at both cellular and molecular levels.
KW - artificial immune system
KW - immune modeling
KW - therapeutic strategies
KW - tuberculosis
UR - https://www.scopus.com/pages/publications/85062550886
U2 - 10.1109/BIBM.2018.8621355
DO - 10.1109/BIBM.2018.8621355
M3 - Conference contribution
AN - SCOPUS:85062550886
T3 - Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
SP - 1386
EP - 1392
BT - Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
A2 - Schmidt, Harald
A2 - Griol, David
A2 - Wang, Haiying
A2 - Baumbach, Jan
A2 - Zheng, Huiru
A2 - Callejas, Zoraida
A2 - Hu, Xiaohua
A2 - Dickerson, Julie
A2 - Zhang, Le
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
Y2 - 3 December 2018 through 6 December 2018
ER -