A MapReduce Based Tool for the Analysis and Discovery of Novel Therapeutic Targets

Giuseppe Parasiliti, Marzio Pennisi, Pietro Biondi, Giuseppe Sgroi, Giulia Russo, Christian Napoli, Francesco Pappalardo

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Abstract

We present here a novel algorithm based on a MapReduce approach to facilitate the discovery of novel therapeutic targets. The proposed algorithm has been enabled to scan a set biological pathways in order to discover non-trivial (less common) routes. Such routes represent a chain of biochemical interactions among different biological actors. These actors can be represented by quite distant nodes along the devised pathway. Our approach detects nodes that are far from the initial target nodes, also showing the number of times that a given route has been found inside the selected set of biological pathways.

Lingua originaleInglese
Titolo della pubblicazione ospiteProceedings - 27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing, PDP 2019
EditoreInstitute of Electrical and Electronics Engineers Inc.
Pagine323-328
Numero di pagine6
ISBN (elettronico)9781728116440
DOI
Stato di pubblicazionePubblicato - 19 mar 2019
Pubblicato esternamente
Evento27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing, PDP 2019 - Pavia, Italy
Durata: 13 feb 201915 feb 2019

Serie di pubblicazioni

NomeProceedings - 27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing, PDP 2019

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???event.eventtypes.event.conference???27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing, PDP 2019
Paese/TerritorioItaly
CittàPavia
Periodo13/02/1915/02/19

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