The ImmunoGrid simulator: How to use it

Francesco Pappalardo; Mark Halling-Brown; Marzio Pennisi; Ferdinando Chiacchio; Clare E. Sansom; Adrian J. Shepherd; David S. Moss; Santo Motta; Vladimir Brusic

doi:10.1007/978-3-642-14571-1_1

The ImmunoGrid simulator: How to use it

Francesco Pappalardo
, Mark Halling-Brown
, Marzio Pennisi
, Ferdinando Chiacchio
, Clare E. Sansom
, Adrian J. Shepherd
, David S. Moss
, Santo Motta
, Vladimir Brusic

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Abstract

In this paper we present the ImmunoGrid project, whose goal is to develop an immune system simulator which integrates molecular and system level models with Grid computing resources for large-scale tasks and databases. We introduce the models and the technologies used in the ImmunoGrid Simulator, showing how to use them through the ImmunoGrid web interface. The ImmunoGrid project has proved that simulators can be used in conjunction with grid technologies for drug and vaccine discovery, demonstrating that it is possible to drastically reduce the developing time of such products.

Original language	English
Title of host publication	Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers
Pages	1-19
Number of pages	19
DOIs	https://doi.org/10.1007/978-3-642-14571-1_1
Publication status	Published - 2010
Externally published	Yes
Event	6th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2009 - Genoa, Italy Duration: 15 Oct 2009 → 17 Oct 2009

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	6160 LNBI
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Conference

Conference	6th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2009
Country/Territory	Italy
City	Genoa
Period	15/10/09 → 17/10/09

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

Access to Document

10.1007/978-3-642-14571-1_1

Cite this

Pappalardo, F., Halling-Brown, M., Pennisi, M., Chiacchio, F., Sansom, C. E., Shepherd, A. J., Moss, D. S., Motta, S., & Brusic, V. (2010). The ImmunoGrid simulator: How to use it. In Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers (pp. 1-19). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 6160 LNBI). https://doi.org/10.1007/978-3-642-14571-1_1

Pappalardo, Francesco ; Halling-Brown, Mark ; Pennisi, Marzio et al. / The ImmunoGrid simulator : How to use it. Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers. 2010. pp. 1-19 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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title = "The ImmunoGrid simulator: How to use it",

abstract = "In this paper we present the ImmunoGrid project, whose goal is to develop an immune system simulator which integrates molecular and system level models with Grid computing resources for large-scale tasks and databases. We introduce the models and the technologies used in the ImmunoGrid Simulator, showing how to use them through the ImmunoGrid web interface. The ImmunoGrid project has proved that simulators can be used in conjunction with grid technologies for drug and vaccine discovery, demonstrating that it is possible to drastically reduce the developing time of such products.",

author = "Francesco Pappalardo and Mark Halling-Brown and Marzio Pennisi and Ferdinando Chiacchio and Sansom, \{Clare E.\} and Shepherd, \{Adrian J.\} and Moss, \{David S.\} and Santo Motta and Vladimir Brusic",

year = "2010",

doi = "10.1007/978-3-642-14571-1\_1",

language = "English",

isbn = "3642145701",

series = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)",

pages = "1--19",

booktitle = "Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers",

note = "6th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2009 ; Conference date: 15-10-2009 Through 17-10-2009",

}

Pappalardo, F, Halling-Brown, M, Pennisi, M, Chiacchio, F, Sansom, CE, Shepherd, AJ, Moss, DS, Motta, S & Brusic, V 2010, The ImmunoGrid simulator: How to use it. in Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 6160 LNBI, pp. 1-19, 6th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2009, Genoa, Italy, 15/10/09. https://doi.org/10.1007/978-3-642-14571-1_1

The ImmunoGrid simulator: How to use it. / Pappalardo, Francesco; Halling-Brown, Mark; Pennisi, Marzio et al.
Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers. 2010. p. 1-19 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 6160 LNBI).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - The ImmunoGrid simulator

T2 - 6th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2009

AU - Pappalardo, Francesco

AU - Halling-Brown, Mark

AU - Pennisi, Marzio

AU - Chiacchio, Ferdinando

AU - Sansom, Clare E.

AU - Shepherd, Adrian J.

AU - Moss, David S.

AU - Motta, Santo

AU - Brusic, Vladimir

PY - 2010

Y1 - 2010

N2 - In this paper we present the ImmunoGrid project, whose goal is to develop an immune system simulator which integrates molecular and system level models with Grid computing resources for large-scale tasks and databases. We introduce the models and the technologies used in the ImmunoGrid Simulator, showing how to use them through the ImmunoGrid web interface. The ImmunoGrid project has proved that simulators can be used in conjunction with grid technologies for drug and vaccine discovery, demonstrating that it is possible to drastically reduce the developing time of such products.

AB - In this paper we present the ImmunoGrid project, whose goal is to develop an immune system simulator which integrates molecular and system level models with Grid computing resources for large-scale tasks and databases. We introduce the models and the technologies used in the ImmunoGrid Simulator, showing how to use them through the ImmunoGrid web interface. The ImmunoGrid project has proved that simulators can be used in conjunction with grid technologies for drug and vaccine discovery, demonstrating that it is possible to drastically reduce the developing time of such products.

UR - https://www.scopus.com/pages/publications/77955801283

U2 - 10.1007/978-3-642-14571-1_1

DO - 10.1007/978-3-642-14571-1_1

M3 - Conference contribution

AN - SCOPUS:77955801283

SN - 3642145701

SN - 9783642145704

T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

SP - 1

EP - 19

BT - Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers

Y2 - 15 October 2009 through 17 October 2009

ER -

Pappalardo F, Halling-Brown M, Pennisi M, Chiacchio F, Sansom CE, Shepherd AJ et al. The ImmunoGrid simulator: How to use it. In Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers. 2010. p. 1-19. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). doi: 10.1007/978-3-642-14571-1_1

The ImmunoGrid simulator: How to use it

Abstract

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UN SDGs

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