Structure of fully protonated proteins by proton-detected magic- Angle spinning NMR

Loren B. Andreas, Kristaps Jaudzems, Jan Stanek, Daniela Lalli, Andrea Bertarelloa, Tanguy Le Marchand, Diane Cala De Paepe, Svetlana Kotelovica, Inara Akopjana, Benno Knott, Sebastian Wegner, Frank Engelke, Anne Lesage, Lyndon Emsley, Kaspars Tars, Torsten Herrmann, Guido Pintacuda

Research output: Contribution to journalArticlepeer-review

Abstract

Protein structure determination by proton-detected magic- Angle spinning (MAS) NMR has focused on highly deuterated samples, in which only a small number of protons are introduced and observation of signals from side chains is extremely limited. Here, we show in two fully protonated proteins that, at 100-kHz MAS and above, spectral resolution is high enough to detect resolved correlations from amide and side-chain protons of all residue types, and to reliably measure a dense network of 1H-1H proximities that define a protein structure. The high data quality allowed the correct identification of internuclear distance restraints encoded in 3D spectra with automated data analysis, resulting in accurate, unbiased, and fast structure determination. Additionally, we find that narrower proton resonance lines, longer coherence lifetimes, and improved magnetization transfer offset the reduced sample size at 100-kHz spinning and above. Less than 2 weeks of experiment time and a single 0.5-mg sample was sufficient for the acquisition of all data necessary for backbone and side-chain resonance assignment and unsupervised structure determination. We expect the technique to pave the way for atomic-resolution structure analysis applicable to a wide range of proteins.

Original languageEnglish
Pages (from-to)9187-9192
Number of pages6
JournalProceedings of the National Academy of Sciences of the United States of America
Volume113
Issue number33
DOIs
Publication statusPublished - 16 Aug 2016
Externally publishedYes

Keywords

  • Magic- Angle spinning
  • NMR spectroscopy
  • Protein structures
  • Proton detection
  • Viral nucleocapsids

Fingerprint

Dive into the research topics of 'Structure of fully protonated proteins by proton-detected magic- Angle spinning NMR'. Together they form a unique fingerprint.

Cite this