RRE: A tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets

F. Lazzarato; G. Franceschinis; M. Botta; F. Cordero; Raffaele A. Calogero

doi:10.1093/bioinformatics/bth287

RRE: A tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets

F. Lazzarato
, G. Franceschinis
, M. Botta
, F. Cordero
, Raffaele A. Calogero

Department of Science and Technological Innovation

Research output: Contribution to journal › Article › peer-review

Abstract

Summary: RRE allows the extraction of non-coding regions surrounding a coding sequence [i.e. gene upstream region, 5′-untranslated region (5′-UTR), introns, 3′-UTR, downstream region] from annotated genomic datasets available at NCBI.

Original language	English
Pages (from-to)	2848-2850
Number of pages	3
Journal	Bioinformatics
Volume	20
Issue number	16
DOIs	https://doi.org/10.1093/bioinformatics/bth287
Publication status	Published - 1 Nov 2004

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title = "RRE: A tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets",

abstract = "Summary: RRE allows the extraction of non-coding regions surrounding a coding sequence [i.e. gene upstream region, 5′-untranslated region (5′-UTR), introns, 3′-UTR, downstream region] from annotated genomic datasets available at NCBI.",

author = "F. Lazzarato and G. Franceschinis and M. Botta and F. Cordero and Calogero, \{Raffaele A.\}",

note = "Funding Information: F.L. is the recipient of a fellowship supported by a PRIN 2002053274 grant. This work was also partially supported by PRIN 2001057147, FIRB RBAU01JTHS and RBNE0157EH grants from the Italian Ministry for the Universities and Scientific and Technical Research (MIUR).",

year = "2004",

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doi = "10.1093/bioinformatics/bth287",

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T2 - A tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets

AU - Lazzarato, F.

AU - Franceschinis, G.

AU - Botta, M.

AU - Cordero, F.

AU - Calogero, Raffaele A.

N1 - Funding Information: F.L. is the recipient of a fellowship supported by a PRIN 2002053274 grant. This work was also partially supported by PRIN 2001057147, FIRB RBAU01JTHS and RBNE0157EH grants from the Italian Ministry for the Universities and Scientific and Technical Research (MIUR).

PY - 2004/11/1

Y1 - 2004/11/1

N2 - Summary: RRE allows the extraction of non-coding regions surrounding a coding sequence [i.e. gene upstream region, 5′-untranslated region (5′-UTR), introns, 3′-UTR, downstream region] from annotated genomic datasets available at NCBI.

AB - Summary: RRE allows the extraction of non-coding regions surrounding a coding sequence [i.e. gene upstream region, 5′-untranslated region (5′-UTR), introns, 3′-UTR, downstream region] from annotated genomic datasets available at NCBI.

UR - https://www.scopus.com/pages/publications/8844239900

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DO - 10.1093/bioinformatics/bth287

M3 - Article

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VL - 20

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EP - 2850

JO - Bioinformatics

JF - Bioinformatics

IS - 16

ER -

RRE: A tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets

Abstract

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