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Crystal Structure of the Ubiquitin Binding Domains of Rabex-5 Reveals Two Modes of Interaction with Ubiquitin

  • Lorenza Penengo
  • , Marina Mapelli
  • , Andrea G. Murachelli
  • , Stefano Confalonieri
  • , Laura Magri
  • , Andrea Musacchio
  • , Pier Paolo Di Fiore
  • , Simona Polo
  • , Thomas R. Schneider

Research output: Contribution to journalArticlepeer-review

Abstract

The interaction between ubiquitinated proteins and intracellular proteins harboring ubiquitin binding domains (UBDs) is critical to a multitude of cellular processes. Here, we report that Rabex-5, a guanine nucleotide exchange factor for Rab5, binds to Ub through two independent UBDs. These UBDs determine a number of properties of Rabex-5, including its coupled monoubiquitination and interaction in vivo with ubiquitinated EGFRs. Structural and biochemical characterization of the UBDs of Rabex-5 revealed that one of them (MIU, motif interacting with ubiquitin) binds to Ub with modes superimposable to those of the UIM (ubiquitin-interacting motif):Ub interaction, although in the opposite orientation. The other UBD, RUZ (Rabex-5 ubiquitin binding zinc finger) binds to a surface of Ub centered on Asp58Ub and distinct from the "canonical" Ile44Ub-based surface. The two binding surfaces allow Ub to interact simultaneously with different UBDs, thus opening new perspectives in Ub-mediated signaling.

Original languageEnglish
Pages (from-to)1183-1195
Number of pages13
JournalCell
Volume124
Issue number6
DOIs
Publication statusPublished - 24 Mar 2006
Externally publishedYes

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