Computational immunogenetics

Marta Gómez Perosanz, Giulia Russo, Jose Luis Sanchez Trincado Lopez, Marzio Pennisi, Pedro A. Reche, Adrian Shepherd, Francesco Pappalardo

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

Abstract

Computational immunogenetics encompasses the use and application of bioinformatics methods, mathematical models and statistical techniques for the study of immune system function. The considerable heterogeneity of the immune system requires systems approaches to be used to model such a complexity and to respond to questions posed by biomedical audience to help them solve biomedical questions. Computational approaches are increasingly vital to understand the implications of the wealth of gene expression and epigenomics data being gathered from immune cells, and dozens of immune databases play a vital role in organizing the vast quantities of experimental data generated by modern high-throughput technologies. Multi-scale methodologies are increasingly being used to characterise the interplay between the molecular, cellular and organism levels of the immune system. Finally, computational immunology is making an important contribution to an emerging field of computational biomedicine: in silico clinical trials.

Original languageEnglish
Title of host publicationEncyclopedia of Bioinformatics and Computational Biology
Subtitle of host publicationABC of Bioinformatics
PublisherElsevier
Pages906-930
Number of pages25
Volume1-3
ISBN (Electronic)9780128114322
ISBN (Print)9780128114148
DOIs
Publication statusPublished - 1 Jan 2018
Externally publishedYes

Keywords

  • Agent based modelling
  • Antibody modelling
  • Bioinformatics for immune system modelling
  • Crystallography
  • Epitopes prediction
  • Immune system modelling
  • Immune system pathways
  • Immunotherapies
  • In silico trials
  • Molecular and cellular modelling
  • Multi-scale modelling
  • ODE modelling
  • Petri nets
  • T and B cells
  • Vaccines

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