2DIs: A SBML compliant web platform for the design and modeling of immune system interactions

Marzio Pennisi, Giulia Russo, Giuseppe Sgroi, Giuseppe Parasiliti, Francesco Pappalardo

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

We present 2DIs, a web platform that allows the easy design of extracellular models of the immune system function, including the possibility to describe the most important immune system entities and interactions and to produce a validated SBML file of the model. 2DIs permits immunologists to directly describe and share their knowledge with other colleagues and, more importantly, with modelers that can therefore obtain an SBML-compliant modelling template of the immunological process that can be used to develop the computational model. This could introduce a novel way of communicating among immunologists and modelers, reducing the risk of errors and misinterpretations.

Original languageEnglish
Title of host publicationIntelligent Computing Theories and Application - 13th International Conference, ICIC 2017, Proceedings
EditorsDe-Shuang Huang, Kang-Hyun Jo, Juan Carlos Figueroa-Garcia
PublisherSpringer Verlag
Pages145-154
Number of pages10
ISBN (Print)9783319633114
DOIs
Publication statusPublished - 2017
Externally publishedYes
Event13th International Conference on Intelligent Computing, ICIC 2017 - Liverpool, United Kingdom
Duration: 7 Aug 201710 Aug 2017

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume10362 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference13th International Conference on Intelligent Computing, ICIC 2017
Country/TerritoryUnited Kingdom
CityLiverpool
Period7/08/1710/08/17

Keywords

  • Immune system modeling
  • Systems biology markup language
  • Web applications

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